Bioinformatics

Services & Fees
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Offered Services

Data Analysis and Bioinformatics Consultation

For NEW customers and NEW projects: Request this project to schedule a consultation with an ICBR staff member to discuss custom project needs and prepare a project outline. The initial consultation is free. Extensive consultation can be arranged at our hourly rate.

Training

Personalized training sessions for the individual scientist covering various bioinformatics topics. In addition, educational materials for a specific teaching module can be developed and presented. Prices will vary.

Service Price List

Last Updated: 08/2019

Consultation and Training

ServicesUFNon-ProfitCommercialDetails
Bioinformatics Training $65$65$65

Personalized, one-on-one bioinformatics training on specific areas of bioinformatics and computational biology.

Consultation$65$65$65Extended client consultation (not including hands on computational effort) on experiment design, analysis planning, methods development.

Customized Data Analysis

ServicesUFNon-ProfitCommercialDetails
Ad-hoc Analysis Services$65$65$65

General category for bioinformatics work, including development of methods and software tools. Ad-hoc analysis services includes ad-hoc analysis, development of software tools and pipelines.

Genome/Transcriptome Assembly and Annotation

ServicesUFNon-ProfitCommercialDetails
Standard Analysis $65$65$65

De-novo whole genome assembly or whole transcriptome assembly. Standard analysis includes QC, read trimming, algorithm selection, assembly, annotation.

Extended Analysis $65$65$65De-novo whole genome assembly or whole transcriptome assembly. Extended analysis includes clustering, GO term analysis, gene prediction, other downstream analysis. This can be requested in addition to Standard Analysis.

Metagenomics Analysis

ServicesUFNon-ProfitCommercialDetails
Standard Analysis $65$65$65

Clustering of DNA sequences from different organisms by taxonomy-dependent or taxonomy-independent means. Standard analysis includes QC, read trimming, algorithm selection, read clustering, diversity and abundance estimation.

Extended Analysis $65$65$65Clustering of DNA sequences from different organisms by taxonomy-dependent or taxonomy-independent means. Extended analysis includes assembly, data integration, species diversity/abundance analysis, comparative metagenomics analysis. This can be requested in addition to Standard Analysis.

Quantitative DNA Sequence Mapping

ServicesUFNon-ProfitCommercialDetails
Standard Analysis $65$65$65

Quantitative mapping and counting of discrete DNA sequences such as in ChIP-Seq, ATAC-Seq, methylation analysis by Whole-Genome Bisulfite Sequencing. Standard analysis includes QC, read trimming, alignment, signal quantification (e.g. methylation, ChIP, ATAC).

Extended Analysis $65$65$65Quantitative mapping and counting of discrete DNA sequences such as in ChIP-Seq, ATAC-Seq, methylation analysis by Whole-Genome Bisulfite Sequencing. Extended analysis includes differential analysis, pathway analysis, network analysis, integrative analysis, etc. This can be requested in addition to Standard Analysis.

Sequence Variation Analysis

ServicesUFNon-ProfitCommercialDetails
Genotyping on Affymetrix Axiom Platform (Customer must supply arrays) $10$10$10
Standard Analysis $65$65$65

Identification of sequence variants such as SNPs and indels in multiple samples. Standard analysis includes QC, read trimming, alignment, SNP and indel calling.

Extended Analysis $65$65$65Identification of sequence variants such as SNPs and indels in multiple samples. Extended analysis includes differential variant analysis, functional SNP annotation, etc. This can be requested in addition to Standard Analysis.

Single-Cell Analysis

ServicesUFNon-ProfitCommercialDetails
Single-Cell RNA-Seq $65$65$65

Transcriptome Analysis

ServicesUFNon-ProfitCommercialDetails
Standard Analysis $65$65$65Gene expression analysis using RNA-Seq or microarray technologies, including non-coding RNAs and alternative splicing analysis. Standard analysis includes QC, read trimming, alignment, transcript quantification, differential expression analysis. 
Extended Analysis $65$65$65Gene expression analysis using RNA-Seq or microarray technologies, including non-coding RNAs and alternative splicing analysis. Extended analysis includes alternative splicing analysis, pathway analysis, network analysis, integrative analysis, etc. This can be requested in addition to Standard Analysis.