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Acknowledgements & Publications
UF
|
ICBR Acknowledgements, Scholarly Articles and Publications
UF | ICBR Acknowledgements
UF | ICBR Staff Publications
Year
Recent Acknowledgements
UF | ICBR Core
2019
Histone Deacetylase Inhibitor Targets CD123/CD47-positive Cells and Reverse Chemoresistance Phenotype in Acute Myeloid Leukemia
Cytometry
2021
Characterization of the GBoV1 Capsid and Its Antibody Interactions
Electron Microscopy
2020
Molecular biology and structure of a novel penaeid shrimp densovirus elucidate convergent parvoviral host capsid evolution
Electron Microscopy
2020
Structural Characterization of Cuta- and Tusavirus: Insight into Protoparvoviruses Capsid Morphology
Electron Microscopy
2020
Attach Me If You Can: Murine Norovirus Binds to Commensal Bacteria and Fungi
Electron Microscopy
2020
Titanium Corrosion in Peri-Implantitis
Electron Microscopy
2020
A new lineage of crayfish-infecting Microsporidia: The Cambaraspora floridanus n. gen. n. sp. (Glugeida: Glugeidae) complex from Floridian freshwaters (USA)
Electron Microscopy
2020
Characterization of a novel picornavirus isolated from moribund aquacultured clownfish
Electron Microscopy
2020
Structural characterization of a bat Adeno-associated virus capsid
Electron Microscopy
2020
Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8
Electron Microscopy
2020
Characterization of AAV-Specific Affinity Ligands: Consequences for Vector Purification and Development Strategies
Electron Microscopy
2021
Completion of the AAV Structural Atlas: Serotype Capsid Structures Reveals Clade-Specific Features
Electron Microscopy
2019
Oncolytic virotherapy for small-cell lung cancer induces immune infiltration and prolongs survival
Cytometry
2018
Infiltrative and drug-resistant slow-cycling cells support metabolic heterogeneity in glioblastoma
Cytometry
2021
Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm
NextGen DNA Sequencing
2020
Root Skewing-Associated Genes Impact the Spaceflight Response of Arabidopsis thaliana
Gene Expression & Genotyping
2020
Transcriptomic signature of gut microbiome-contacting cells in colon of spontaneously hypertensive rats
Bioinformatics
,
Gene Expression & Genotyping
,
NextGen DNA Sequencing
2019
Dickkopf-related protein 1 is a progestomedin acting on the bovine embryo during the morula-to-blastocyst transition to program trophoblast elongation
Bioinformatics
,
Gene Expression & Genotyping
2019
Human colon mucosal biofilms from healthy or colon cancer hosts are carcinogenic
Gene Expression & Genotyping
,
NextGen DNA Sequencing
2018
Sex-specific airway hyperreactivity and sex-specific transcriptome remodeling in neonatal piglets challenged with intra-airway acid
Gene Expression & Genotyping
,
NextGen DNA Sequencing
2019
Type I interferon and interferon‐stimulated gene expression in oral epithelial cells
Gene Expression & Genotyping
2020
Malignant round cell tumor with SS18‐POU5F1 fusion: is it a myoepithelial neoplasm, a synovial sarcoma or a new entity?
Gene Expression & Genotyping
2020
Clinical efficacy of spray‐based heat‐treated lactobacilli in canine atopic dermatitis: a preliminary, open‐label, uncontrolled study
Gene Expression & Genotyping
2021
Analysis of canine myeloid-derived suppressor cells (MDSCs) utilizing fluorescence-activated cell sorting, RNA protection mediums to yield quality RNA for single-cell RNA sequencing
Bioinformatics
,
Cytometry,
Gene Expression & Genotyping
2021
Biological features between miRNAs and their targets are unveiled from deep learning models
Business Services
2021
Dnmt3b catalytic activity is critical for its tumour suppressor function in lymphomagenesis and is associated with c-Met oncogenic signalling
Bioinformatics
,
Cytometry
2021
Genome sequence of Monilinia vaccinii-corymbosi sheds light on mummy berry disease infection of blueberry and mating type
NextGen DNA Sequencing
2021
De novo assembly and annotation of a highly contiguous reference genome of the fathead minnow (Pimephales promelas) reveals an AT-rich repetitive genome with compact gene structure
NextGen DNA Sequencing
2021
SARS-CoV-2 infection of BNT162b2(mRNA)-vaccinated individuals is not restricted to variants of concern or high-risk exposure environments
Bioinformatics
,
Gene Expression & Genotyping,
NextGen DNA Seqeuncing
2021
Islet sympathetic innervation and islet neuropathology in patients with type 1 diabetes
Bioinformatics
,
Gene Expression & Genotyping
2021
The Complete Mitochondrial Genome of the American Palm Cixiid, Haplaxius crudus (Hemiptera: Cixiidae)
Gene Expression & Genotyping
2021
c-di-AMP is essential for the virulence of Enterococcus faecalis
Electron Microscopy
,
NextGen DNA Sequencing
2021
Morphological and Cytological Characterization of Five Porterweed (Stachytarpheta) Selections
Cytometry
2021
High pyocyanin production and non-motility of Pseudomonas aeruginosa isolates are correlated with septic shock or death in bacteremic patients
Electron Microscopy
2021
Improved Genome Packaging Efficiency of AAV Vectors Using Rep Hybrids
Electron Microscopy
2021
Use of NanoSIMS to Identify the Lower Limits of Metabolic Activity and Growth by Serratia liquefaciens Exposed to Sub-Zero Temperatures
Electron Microscopy
2021
Identifying gene regulatory networks of senescence in postharvest broccoli (Brassica oleracea)
Gene Expression & Genotyping
2021
Genomic and Targeted Approaches Unveil the Cell Membrane as a Major Target of the Antifungal Cytotoxin Amantelide A
Gene Expression & Genotyping
2021
Exertional heat stroke leads to concurrent long-term epigenetic memory, immunosuppression and altered heat shock response in female mice
Gene Expression & Genotyping
2021
Novel application of single-cell next-generation sequencing for determination of intratumoral heterogeneity of canine osteosarcoma cell lines
Gene Expression & Genotyping
2021
Epigenomic Regulators Elongator Complex Subunit 2 and Methyltransferase 1 Differentially Condition the Spaceflight Response in Arabidopsis
Gene Expression & Genotyping,
NextGen DNA Sequencing
,
Bioinformatics
2021
Increased Oxidative Stress Tolerance of a Spontaneously Occurring perR Gene Mutation in Streptococcus mutans UA159
Gene Expression & Genotyping
2021
Effects of Altering Heparan Sulfate Proteoglycan Binding and Capsid Hydrophilicity on Retinal Transduction by Adeno-associated Virus
Electron Microscopy
2021
Aldoximes are precursors of auxins in Arabidopsis and maize
Proteomics & Mass Spectrometry
2019
Monoclonal Antibody against CXCL1 (HL2401) as a Novel Agent in Suppressing IL6 Expression and Tumoral Growth
Monoclonal Antibody
2022
Structurally Mapping Antigenic Epitopes of Adeno-associated Virus 9: Development of Antibody Escape Variants
Monoclonal Antibody,
Electron Microscopy
2022
“Attacking−Attacking” Anti-biofouling Strategy Enabled by Cellulose Nanocrystals−Silver Materials
Monoclonal Antibody,
Electron Microscopy
2021
The scaffold protein XRCC1 stabilizes the formation of polβ/gap DNA and ligase IIIα/nick DNA complexes in base excision repair
Monoclonal Antibody
2021
Enhancement of trans-cleavage activity of Cas12a with engineered crRNA enables amplified nucleic acid detection
Monoclonal Antibody
2021
Novel CD33 antibodies unravel localization, biology and therapeutic implications of CD33 isoforms
Cytometry,
Monoclonal Antibody
2021
Engineering magnetic nanoparticles and their integration with microfluidics for cell isolation
Cytometry
2021
CCR2 inhibition reduces tumor myeloid cells and unmasks a checkpoint inhibitor effect to slow progression of resistant murine gliomas
Cytometry
2021
DNMT3A harboring leukemia-associated mutations directs sensitivity to DNA damage at replication forks
Cytometry
2021
pH-Induced Conformational Changes of Human Bocavirus Capsids
Electron Microscopy
2021
Characterization and proteomic analysis of outer membrane vesicles from a commensal microbe, Enterobacter cloacae
Electron Microscopy,
Cytometry
Year
Publication Title
Core
Personnel
2020
Malignant round cell tumor with SS18‐POU5F1 fusion: is it a myoepithelial neoplasm, a synovial sarcoma or a new entity?
Gene Expression & Genotyping
Yanping Zhang
2021
Destabilization of Immersed Dense Granular Material Submitted to Localized Fluidization: An Experimental and Numerical Study
Gene Expression & Genotyping
Yanping Zhang
2022
Low-frequency variants in mildly symptomatic vaccine breakthrough infections presents a doubled-edged sword
Gene Expression & Genotyping
Yanping Zhang
2022
Endocrine, immune and renal toxicity in male largemouth bass after chronic exposure to glyphosate and Rodeo
Gene Expression & Genotyping
Yanping Zhang
2022
First in class multifunctional non classical antifolates inhibits thymidylate synthase and extends survival in pancreatic cancer model
Cytometry
Patrick Kellish
2022
Detection of PD-L1–Expressing Myeloid Cell Clusters in the Hyaluronan-Enriched Stroma in Tumor Tissue and Tumor-Draining Lymph Nodes
Cytometry
Mariza Miranda
2021
Conspecific and heterospecific pheromones stimulate dispersal of entomopathogenic nematodes during quiescence
Monoclonal Antibody
Angel Sampson
2021
Transfer of oral bacteria to the fetus during late gestation
Bioinformatics
Tongjun Gu
2021
Bioinformatics Core Survey Highlights the Challenges Facing Data Analysis Facilities
Bioinformatics
Alberto Riva
2022
PRC2 Inhibitors Overcome Glucocorticoid Resistance Driven by NSD2 Mutation in Pediatric Acute Lymphoblastic Leukemia
Bioinformatics
Alberto Riva
2022
Discordance between HIV-1 Population in Plasma at Rebound after Structured Treatment Interruption and Archived Provirus Population in Peripheral Blood Mononuclear Cells
Bioinformatics
Alberto Riva
2022
Rapid Emergence and Spread of Severe Acute Respiratory Syndrome Coronavirus 2 Gamma (P.1) Variant in Haiti
Bioinformatics
Alberto Riva
2022
Acquired Resistance to EZH2 Inhibitor GSK343 Promotes the Differentiation of Human DLBCL Cell Lines toward an ABC-Like Phenotype
Bioinformatics
Alberto Riva
2022
DNMT3A harboring leukemia-associated mutations directs sensitivity to DNA damage at replication forks
Bioinformatics
Alberto Riva
2022
Phylogenetic-informed graph deep learning to classify dynamic transmission clusters in infectious disease epidemics
Bioinformatics
Alberto Riva
2021
Methylscaper: an R/Shiny app for joint visualization of DNA methylation and nucleosome occupancy in single-molecule and single-cell data
Bioinformatics
Alberto Riva
2021
Functional CRISPR Screening Identifies Ptprg As a Driver of Migration and Adhesion in NSD2-E1099K ALL
Bioinformatics
Alberto Riva
2021
Dnmt3a Mutations in the Hematopoietic System Promote Colitis-Associated Colon Cancer: A Model of Clonal Hematopoiesis in Solid Tumors
Bioinformatics
Alberto Riva
2021
Adenylate Kinase 2 Is a Selective Multiple Myeloma Cell Dependency That Is Preferentially Essential in NSD2-Overexpressing Cells
Bioinformatics
Alberto Riva
2021
Dysregulation of Epigenetic Landscape Uncovered the Mechanisms Underlying the Relapse of Pediatric Acute Lymphoblastic Leukemia with NSD2 Mutation
Bioinformatics
Alberto Riva
2021
CLONAL HEMATOPOIESIS DRIVEN BY PARTIAL DNMT3A LOSS CONTRIBUTES TO AN AGGRESSIVE PHENOTYPE OF COLITIS-ASSOCIATED COLON CANCER
Bioinformatics
Alberto Riva
2021
Examination of CA1 Hippocampal DNA Methylation as a Mechanism for Closing of Estrogen's Critical Window
Bioinformatics
Alberto Riva
2021
HDAC8 activity regulates stress induced phenotype switching in melanoma
Bioinformatics
Alberto Riva
2021
SARS-CoV-2 infection of BNT162b2(mRNA)-vaccinated individuals is not restricted to variants of concern or high-risk exposure environments
Bioinformatics,
Gene Expression & Genotyping,
NextGen DNA Sequencing
Alberto Riva,
Yanping Zhang
,
David Moraga
2022
SARS-CoV-2 Delta vaccine breakthrough transmissibility in Alachua County, Florida
Bioinformatics,
Gene Expression & Genotyping,
NextGen DNA Sequencing
Alberto Riva,
Yanping Zhang
,
David Moraga
2022
Low-frequency variants in mildly symptomatic vaccine breakthrough infections presents a doubled-edged sword
Bioinformatics,
Gene Expression & Genotyping,
NextGen DNA Sequencing
Alberto Riva,
Yanping Zhang
,
David Moraga
2021
SARS-CoV-2 shifting transmission dynamics and hidden reservoirs potentially limit efficacy of public health interventions in Italy
Bioinformatics
Alberto Riva
2021
Brain tissue transcriptomic analysis of SIV-infected macaques identifies several altered metabolic pathways linked to neuropathogenesis and poly (ADP-ribose) polymerases (PARPs) as potential therapeutic targets
Bioinformatics,
NextGen DNA Sequencing
Alberto Riva,
David Moraga
2021
Effects of photo-stimulation with laser or LED on the composition of Xanthan gum produced in media containing distilled water or dialyzed or not produced water by means of Raman spectroscopy
NextGen DNA Sequencing
David Moraga
2021
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
ffects of photo-stimulation with laser or LED on the composition of Xanthan gum produced in media containing distilled water or dialyzed or not produced water by means of Raman spectroscopy
NextGen DNA Sequencing
David Moraga
2021
Novel application of single-cell next-generation sequencing for determination of intratumoral heterogeneity of canine osteosarcoma cell lines
Bioinformatics
Alberto Riva
2021
Dnmt3b Catalytic Activity is critical for its tumour suppressor function in lymphomagenesis and is associated with c-Met oncogenic signaling
Bioinformatics
Alberto Riva
2021
Exertional heat stroke leads to concurrent long-term epigenetic memory, immunosuppression and altered heat shock response in female mice
Bioinformatics
Alberto Riva
2021
Analysis of canine myeloid-derived suppressor cells (MDSCs) utilizing fluorescence-activated cell sorting, RNA protection mediums to yield quality RNA for single-cell RNA sequencing
Bioinformatics,
Cytometry
Alberto Riva,
Andria Doty
2021
Microglial FACS for Robust RNA Recovery for Next-Generation Sequencing
Cytometry
Andria Doty
2021
The Value of Integrating Fluorescent Imaging and Immunohistochemistry for Future Anatomical Studies in Aesthetic Surgery: Lessons From the Cerebrospinal Fluid (CSF) Circulatory System of Human Nerves and Brain
Cytometry
Doug Smith
2021
A robust method of nuclei isolation for single-cell RNA sequencing of solid tissues from the plant genus Populus
Cytometry
Andria Doty,
Mariza Miranda
2021
Biological features between miRNA and their targets are unveiled from deep learning models
Bioinformatics
Tongjun Gu
2021
Sequencing of Argonaute-bound microRNA/mRNA hybrids reveals regulation of the unfolded protein response by microRNA-320a
Bioinformatics
Tongjun Gu
2020
miTAR: a hybrid deep learning-based approach for predicting miRNA targets
Bioinformatics
Tongjun Gu
2020
Uterine infusion of bacteria alters the transcriptome of bovine oocytes
Bioinformatics
Fahong Yu
2021
Azithromycin and Ciprofloxacin Can Promote Antibiotic Resistance in Biosolids and Biosolids-Amended Soils
Bioinformatics
Fahong Yu
2022
Endocrine, immune and renal toxicity in male largemouth bass after chronic exposure to glyphosate and Rodeo®
Bioinformatics
Fahong Yu
2021
Clinical efficacy of spray-based heat-treated lactobacilli in canine atopic dermatitis: a preliminary, open-label, uncontrolled study
Bioinformatics,
Gene Expression & Genotyping
Fahong Yu,
Yanping Zhang
2021
Dissemination mechanisms of NDM genes in hospitalized patients
Bioinformatics
Fahong Yu
2020
Dissemination Mechanisms of New Delhi Metallo-β-lactamase Genes in Hospitalized Patients
Bioinformatics
Fahong Yu
2021
Genomic and Targeted Approaches Unveil the Cell Membrane as a Major Target of the Antifungal Cytotoxin Amantelide A
Bioinformatics
Tongjun Gu
2021
Comparative structural, biophysical, and receptor binding study of true type and wild type AAV2
Electron Microscopy
Paul Chipman
2021
pH-Induced Conformational Changes of Human Bocavirus Capsids
Electron Microscopy
Paul Chipman
2022
Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity
Electron Microscopy
Paul Chipman
2022
Structural characterization of an envelope-associated adeno-associated virus type 2 capsid
Electron Microscopy
Paul Chipman
2021
Improved Genome Packaging Efficiency of Adeno-associated Virus Vectors Using Rep Hybrids
Electron Microscopy
Paul Chipman
2021
Completion of the AAV Structural Atlas: Serotype Capsid Structures Reveals Clade-Specific Features
Electron Microscopy
Paul Chipman
2021
Structurally Mapping Antigenic Epitopes of Adeno-associated Virus 9: Development of Antibody Escape Variants
Electron Microscopy
Paul Chipman
2020
Structural Characterization of Cuta- and Tusavirus: Insight into Protoparvoviruses Capsid Morphology
Electron Microscopy
Paul Chipman
2020
Structural characterization of a bat Adeno-associated virus capsid
Electron Microscopy
Paul Chipman
2020
Characterization of AAV-Specific Affinity Ligands: Consequences for Vector Purification and Development Strategies
Electron Microscopy
Paul Chipman
2022
Carry-over effects of dry period heat stress on the mammary gland proteome and phosphoproteome in the subsequent lactation of dairy cows
Proteomics & Mass Spectrometry
Jin Koh
,
Ning Zhu,
Fanchao Zhu
2013
Quantitative proteomics of vitreous humor to identify potential markers involved in the induction of posterior vitreous detachment
Proteomics & Mass Spectrometry
Jin Koh
2020
Proteomics data of SNF1-related protein kinase 2.4 interacting proteins revealed by immunoprecipitation-mass spectrometry
Proteomics & Mass Spectrometry
Jin Koh
2015
Spaceflight Induces Specific Alterations in the Proteomes of Arabidopsis
Proteomics & Mass Spectrometry
, Administration
Jin Koh
,
Anna-Lisa Paul
2018
Follicular fluid exosomes act on the bovine oocyte to improve oocyte competence to support development and survival to heat shock
Proteomics & Mass Spectrometry
Jin Koh
2017
Remodeling of the Streptococcus mutans proteome in response to LrgAB and external stresses
Proteomics & Mass Spectrometry
Jin Koh
2019
Label-free and iTRAQ proteomics analysis in the liver of zebrafish (Danio rerio) following dietary exposure to the organochlorine pesticide dieldrin
Proteomics & Mass Spectrometry
Jin Koh
2020
Diversity in A? deposit morphology and secondary proteome insolubility across models of Alzheimer-type amyloidosis
Proteomics & Mass Spectrometry
Jin Koh
,
Fanchao Zhu
2017
Uncovering stem cell differentiation factors for salivary gland regeneration by quantitative analysis of differential proteomes
Proteomics & Mass Spectrometry
Jin Koh
2018
CD117+ Exosomes and Mast Cells From Hereditary Alpha Tryptasemia Patients Reveal Unique Phosphorylation, Lipidomics, and Proteomics Profiles: Category Award (Small Intestine): Presidential Poster Award
Proteomics & Mass Spectrometry
Jin Koh
2020
Jasmonate induced alternative splicing responses in
Arabidopsis
Proteomics & Mass Spectrometry
Jin Koh
2020
Secretome Analysis of Inductive Signals for BM-MSC Transdifferentiation into Salivary Gland Progenitors
Proteomics & Mass Spectrometry
Jin Koh
2020
Bisphenol A and bisphenol S disruptions of the mouse placenta and potential effects on the placenta-brain axis
Proteomics & Mass Spectrometry
Jin Koh
,
Ning Zhu
2020
Identification of proteins associated with two diverse Caulobacter Phicbkviruses
Proteomics & Mass Spectrometry
Ran Zheng,
Fanchao Zhu
2016
Genome-wide identification and homeolog-specific expression analysis of the SnRK2 genes in Brassica napus guard cells
Proteomics & Mass Spectrometry
Jin Koh
,
Ning Zhu
2019
Hepatic proteome network data in zebrafish (Danio rerio) liver following dieldrin exposure
Proteomics & Mass Spectrometry
Jin Koh
2019
The Proteome of Pancreatic Cancer?Derived Exosomes Reveals Signatures Rich in Key Signaling Pathways
Proteomics & Mass Spectrometry
Fanchao Zhu
2018
Quantitative assessment of intestinal stiffness and associations with fibrosis in human inflammatory bowel disease
Cytometry
Andria Doty
2016
The differential frequency of Lineage?CRTH2?CD45+NKp44?CD117?CD127+ILC subset in the inflamed terminal ileum of patients with Crohns disease
Cytometry
Andria Doty
2020
A novel approach to study markers of dopamine signaling in peripheral immune cells
Cytometry
Andria Doty
2017
Increased Mucosal IL-22 Production of an IL-10RA Mutation Patient Following Anakinra Treatment Suggests Further Mechanism for Mucosal Healing
Cytometry
Andria Doty
2016
Aryl hydrocarbon receptor signaling involves in the human intestinal ILC3/ILC1 conversion in the inflamed terminal ileum of Crohns disease patients
Cytometry
Andria Doty
2019
Dopamine transporter is dysregulated on the peripheral immune cells of drug naïve Parkinson's Disease patients
Cytometry
Andria Doty
2013
In vitro studies on the role of seminal plasma proteins on the interaction between polymorphonuclear neutrophils (PMNs) and spermatozoa in the horse
Cytometry
Andria Doty
2020
Novel CD33 antibodies unravel localization, biology and therapeutic implications of CD33 isoforms
Cytometry
Andria Doty
2019
A New Ball for an Old Trick: Paramagnetic Cell Sorting of Human Mesenchymal Stem Cells from Adipose Tissue
Cytometry
Andria Doty
2019
Characterization and printability of Sodium alginate -Gelatin hydrogel for bioprinting NSCLC co-culture
Cytometry
Mariza Miranda
2021
Cytotoxic and chemosensitizing effects of glycoalkaloidic extract on 2D and 3D models using RT4 and patient derived xenografts bladder cancer cells
Cytometry
Mariza Miranda
2017
Structural Insights into Human Bocaparvoviruses
Electron Microscopy
Paul Chipman
2016
Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging
Electron Microscopy
Paul Chipman
2020
Comparative Analysis of the Capsid Structures of AAVrh.10, AAVrh.39, and AAV8
Electron Microscopy
Paul Chipman
2018
Atomic structure of a rationally engineered gene delivery vector, AAV2.5
Electron Microscopy
Paul Chipman
2017
Atomic Resolution Structures of Human Bufaviruses Determined by Cryo-Electron Microscopy
Electron Microscopy
Paul Chipman
2015
Adeno-Associated Virus Serotype 1 (AAV1)- and AAV5-Antibody Complex Structures Reveal Evolutionary Commonalities in Parvovirus Antigenic Reactivity
Electron Microscopy
Paul Chipman
2018
AAV6 K531 serves a dual function in selective receptor and antibody ADK6 recognition
Electron Microscopy
Paul Chipman
2017
Atomic Resolution Structure of the Oncolytic Parvovirus LuIII by Electron Microscopy and 3D Image Reconstruction
Electron Microscopy
Paul Chipman
2018
High-Resolution Structural Characterization of a New Adeno-associated Virus Serotype 5 Antibody Epitope toward Engineering Antibody-Resistant Recombinant Gene Delivery Vectors
Electron Microscopy
Paul Chipman
2013
Membrane curvature in flaviviruses
Electron Microscopy
Paul Chipman
2020
Molecular biology and structure of a novel penaeid shrimp densovirus elucidate convergent parvoviral host capsid evolution
Electron Microscopy
Paul Chipman
2016
Microbatch Mixing: Shaken not Stirred, a Method for Macromolecular Microcrystal Production for Serial Crystallography
Electron Microscopy
Paul Chipman
2018
Structural Characterization of Emerging Pathogenic Human Parvoviruses
Electron Microscopy
Paul Chipman
2020
Characterization of AAV-Specific Affinity Ligands: Consequences for Vector Purification and Development Strategies
Electron Microscopy
Paul Chipman
2016
Structural Rearrangements in R432A Variant of AAV2 Affect Genome Packaging
Electron Microscopy
Paul Chipman
2014
Adeno-associated virus serotypes 1 and 5 antibody complex structures reveal evolutionary commonalities in parvovirus antigenic reactivity
Electron Microscopy
Paul Chipman
2016
Characterizing AAV CaptureSelect Affinity Ligand Interactions
Electron Microscopy
Paul Chipman
2016
Megalocytivirus infection in cultured Nile tilapia Oreochromis niloticus
Electron Microscopy
Karen Kelley
2013
Transgenerational Transmission of the Glossina pallidipes Hytrosavirus Depends on the Presence of a Functional Symbiome
Electron Microscopy
Karen Kelley
2021
The Mechanism of Mitochondrial Injury in Alpha-1 Antitrypsin Deficiency Mediated Liver Disease
Electron Microscopy
Karen Kelley
2022
Effect of Nanosulfur Against Multidrug-Resistant Staphylococcus pseudintermedius and Pseudomonas aeruginosa
Electron Microscopy
Karen Kelley
2013
Immunohistochemical Detection of a Unique Protein within Cells of Snakes Having Inclusion Body Disease, a World-Wide Disease Seen in Members of the Families Boidae and Pythonidae
Electron Microscopy
Karen Kelley
2013
Megalocytivirus infection in orbiculate batfish Platax orbicularis
Electron Microscopy
Karen Kelley
2015
Carp Edema Virus Disease (CEVD) / Koi Sleepy Disease (KSD)1
Electron Microscopy
Karen Kelley
2020
Isolation, Characterization, and Complete Genome Sequence of a Bradyrhizobium Strain Lb8 From Nodules of Peanut Utilizing Crack Entry Infection
Electron Microscopy
Karen Kelley
2020
Characterization of a novel picornavirus isolated from moribund aquacultured clownfish
Electron Microscopy
Karen Kelley
,
Paul Chipman
,
Rudy Alvarado
,
2015
Reduced Infectivity in Cattle for an Outer Membrane Protein Mutant of Anaplasma marginale
Electron Microscopy
Karen Kelley
2017
A Dimorphic and Virulence-Enhancing Endosymbiont Bacterium Discovered in Rhizoctonia solani
Electron Microscopy
Karen Kelley
2014
Akashiwo sanguinea (Dinophyceae) extruding mucous from pores on the cell surface
Electron Microscopy
Karen Kelley
2019
Hierarchical self-assembly and emergent function of densely glycosylated peptide nanofibers
Electron Microscopy
Karen Kelley
2017
Physiological, molecular and ultrastructural analyses during ripening and over?ripening of banana (Musa spp., AAA group, Cavendish sub?group) fruit suggest characteristics of programmed cell death
Electron Microscopy
Karen Kelley
2013
A method for preparing spaceflight RNAlater?fixed Arabidopsis thaliana (Brassicaceae) tissue for scanning electron microscopy
Electron Microscopy
, Administration
Karen Kelley
,
Anna-Lisa Paul
2017
In situ observations of Akashiwo sanguinea(Dinophyceae) displaying life cycle stages during blooms in a subtropical estuary
Electron Microscopy
Karen Kelley
2018
Involvement of Root Hair during Rhizobial Invasion in Cultivated Peanut (Arachis hypogaea L.)
Electron Microscopy
Karen Kelley
2016
Genetic characterization of esocid herpesvirus 1 (EsHV1)
Electron Microscopy
Karen Kelley
2019
A defective release of host defense peptides is present in canine atopic skin
Electron Microscopy
Karen Kelley
2014
Ball Python Nidovirus: a Candidate Etiologic Agent for Severe Respiratory Disease in Python regius
Electron Microscopy
Karen Kelley
2021
Injectable nanofibrillar hydrogels based on charge-complementary peptide co-assemblies
Electron Microscopy
Karen Kelley
,
Kimberly Backer-Kelley
2015
Antimicrobial dressing efficacy against mature Pseudomonas aeruginosa biofilm on porcine skin explants
Monoclonal Antibody
Edith Sampson
2013
Development of a novel ex vivo porcine skin explant model for the assessment of mature bacterial biofilms
Monoclonal Antibody
Edith Sampson
2015
The collagen binding protein Cnm contributes to oral colonization and cariogenicity of Streptococcus mutans OMZ175
Monoclonal Antibody
Edith Sampson
2019
GSTA4 mediates reduction of cisplatin ototoxicity in female mice
Monoclonal Antibody
Edith Sampson
2018
Deletion of a conserved transcript PG_RS02100 expressed during logarithmic growth in Porphyromonas gingivalis results in hyperpigmentation and increased tolerance to oxidative stress
Monoclonal Antibody
Edith Sampson
2017
Lack of pheromone reduces nematode dispersal
Monoclonal Antibody
Edith Sampson
2014
Streptococcus mutans OMZ175 invasion of human tissues in culture
Monoclonal Antibody
Edith Sampson
2015
Development and validation of a competitive enzyme-linked immunosorbent assay for the measurement of total plasma immunoglobulins in healthy loggerhead sea (Caretta caretta) and green turtles (Chelonia mydas)
Monoclonal Antibody
Shadi Bootorabi
2018
Transcript Profiling of MRSA Biofilms Treated with a Halogenated Phenazine Eradicating Agent: A Platform for Defining Cellular Targets and Pathways Critical to Biofilm Survival
Gene Expression & Genotyping
Yanping Zhang
2013
The Arabidopsis Mediator complex subunits MED14/SWP and MED16/SFR6/IEN1 differentially regulate defense gene expression in plant immune responses
Gene Expression & Genotyping
Yanping Zhang
2015
Arabidopsis Elongator subunit 2 positively contributes to resistance to the necrotrophic fungal pathogens Botrytis cinerea and Alternaria brassicicola
Gene Expression & Genotyping
Yanping Zhang
2018
Exogenous Nicotinamide Adenine Dinucleotide Induces Resistance to Citrus Canker in Citrus
Gene Expression & Genotyping
Yanping Zhang
2016
Effects of Long-Term Exercise on Age-Related Hearing Loss in Mice
Gene Expression & Genotyping
Yanping Zhang
2017
Single-cell gene expression of the bovine blastocyst
Gene Expression & Genotyping
Yanping Zhang
2019
Extracellular pyridine nucleotides trigger plant systemic immunity through a lectin receptor kinase/BAK1 complex
Gene Expression & Genotyping
Yanping Zhang
2014
Catechol-O-Methyltransferase Polymorphisms Predict Opioid Consumption in Postoperative Pain
Gene Expression & Genotyping
Yanping Zhang
2019
Increased burden of mitochondrial DNA deletions and point mutations in early-onset age-related hearing loss in mitochondrial mutator mice
Gene Expression & Genotyping
Yanping Zhang
2015
Gene expression profiling leads to discovery of correlation of matrix metalloproteinase 11 and heparanase 2 in breast cancer progression
Gene Expression & Genotyping
Yanping Zhang
2018
The Arabidopsis Elongator Subunit ELP3 and ELP4 Confer Resistance to Bacterial Speck in Tomato
Gene Expression & Genotyping
Yanping Zhang
2016
The Elongator complex?associated protein DRL1 plays a positive role in immune responses against necrotrophic fungal pathogens in Arabidopsis
Gene Expression & Genotyping
Yanping Zhang
2019
Transcriptomic Analysis of Aedes aegypti Innate Immune System in Response to Ingestion of Chikungunya Virus
Gene Expression & Genotyping
Yanping Zhang
2013
Gene expression profiling in the ovary of Queen conch (Strombus gigas) exposed to environments with high tributyltin in the British Virgin Islands
Gene Expression & Genotyping
Yanping Zhang
2015
The Arabidopsis Mediator Complex Subunit16 Is a Key Component of Basal Resistance against the Necrotrophic Fungal Pathogen Sclerotinia sclerotiorum
Gene Expression & Genotyping
Yanping Zhang
2017
A lectin receptor kinase as a potential sensor for extracellular nicotinamide adenine dinucleotide in Arabidopsis thaliana
Gene Expression & Genotyping
Yanping Zhang
2013
The Arabidopsis Elongator Complex Subunit2 Epigenetically Regulates Plant Immune Responses
Gene Expression & Genotyping,
Bioinformatics,
NextGen DNA Sequencing
Yanping Zhang, David Moraga Amador, Fahong Yu
2018
Transcriptome analysis reveals novel insights into the response of low-dose benzo(a)pyrene exposure in male tilapia
NextGen DNA Sequencing
David Moraga Amador
2018
Identification of a metabolic disposal route for the oncometabolite S-(2-succino)cysteine in Bacillus subtilis
NextGen DNA Sequencing
David Moraga Amador
2020
Investigating the gene expression profiles of rehabilitated Florida manatees (Trichechus manatus latirostris) following red tide exposure
NextGen DNA Sequencing
,
Bioinformatics
David Moraga Amador, Fahong Yu
2019
Endohyphal bacteria associated with virulence, increased expression of fumonisin biosynthetic genes, and production of fumonisin and macroconidia in Fusarium fujikuroi W343
NextGen DNA Sequencing,
Electron Microscopy
David Moraga Amador, Karen Kelley
2018
Tissue-Based Mapping of the Fathead Minnow (Pimephales promelas) Transcriptome and Proteome
NextGen DNA Sequencing
,
Bioinformatics
David Moraga Amador, Fahong Yu
2018
Gene expression profile and molecular pathway datasets resulting from benzo(a)pyrene exposure in the liver and testis of adult tilapia
NextGen DNA Sequencing
David Moraga Amador
2013
Custom microarray construction and analysis for determining potential biomarkers of subchronic androgen exposure in the Eastern Mosquitofish (Gambusia holbrooki)
NextGen DNA Sequencing
,
Bioinformatics
David Moraga Amador, Fahong Yu
2020
Enabling the Spaceflight Methylome: DNA Isolated from Plant Tissues Preserved in RNAlater® Is Suitable for Bisulfite PCR Assay of Genome Methylation
NextGen DNA Sequencing
, Administration
David Moraga Amador
,
Anna-Lisa Paul
2020
Brain tissue transcriptomic analysis of SIV-infected macaques identifies Poly (ADP-ribose) polymerases (PARPs) as potential biomarkers for neuropathogenesis
Bioinformatics
David Moraga Amador, Alberto Riva
2020
Combining epiGBS markers with long read transcriptome sequencing to assess differentiation associated with habitat in Reynoutria (aka Fallopia)
NextGen DNA Sequencing
David Moraga Amador
2013
Modified Library Construction Method for 3-5kb Illumina Mate-pair Libraries
NextGen DNA Sequencing
David Moraga Amador, Nedka Panayotova, Xiao H. Zhou
2018
S?Succinylcysteine Breakdown How Bacillus subtilis Utilizes an Inevitable Product of Metabolite Damage
NextGen DNA Sequencing
David Moraga Amador
2013
Direct Sequencing of Linear DNA on PacBio RS Without Library Preparation
NextGen DNA Sequencing
David Moraga Amador, Xiao H. Zhou
2013
Library Construction for Genome-wide Bisulfite Sequencing in Plants
NextGen DNA Sequencing
David Moraga Amador
2019
Spaceflight-induced alternative splicing during seedling development in Arabidopsis thaliana
Bioinformatics
, Administration
W. Brad Barbazuk, Anna-Lisa Paul
2013
Complete Genome Sequence of Serratia liquefaciens Strain ATCC 27592
NextGen DNA Sequencing
Nedka Panayotova
2013
Complete Genome Sequence of Carnobacterium gilichinskyi Strain WN1359T (DSM 27470T)
NextGen DNA Sequencing
Nedka Panayotova
2014
Tyrosine phosphorylation of protein kinase complex BAK1/BIK1 mediates Arabidopsis innate immunity
Proteomics & Mass Spectrometry
Ning Zhu
2015
Gold Nanoparticle-Enabled Blood Test for Early Stage Cancer Detection and Risk Assessment
Proteomics & Mass Spectrometry
Ning Zhu
2013
Proteomic profiling of developing cotton fibers from wild and domesticated Gossypium barbadense
Proteomics & Mass Spectrometry
Jin Koh
2019
Streamlining DNA Sequencing and Bioinformatics Analysis Using Software Containers
Bioinformatics
W. Brad Barbazuk, Tongjun Gu, Alberto Riva, Fahong Yu
2015
Comparative Proteomic Analysis of Brassica napus in Response to Drought Stress
Proteomics & Mass Spectrometry
Ning Zhu, Jin Koh
2019
Physiological and comparative proteomic analyses of saline-alkali NaHCO3-responses in leaves of halophyte Puccinellia tenuiflora
Proteomics & Mass Spectrometry
Ning Zhu
2018
Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability
Proteomics & Mass Spectrometry
Jin Koh
2016
Clinical effects of driver somatic mutations on the outcomes of patients with myelodysplastic syndromes treated with allogeneic hematopoietic stem-cell transplantation
Bioinformatics
Alberto Riva
2017
UTX/KDM6A loss enhances the malignant phenotype of multiple myeloma and sensitizes cells to EZH2 inhibition
Bioinformatics
Alberto Riva
2014
Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma
Bioinformatics
Alberto Riva
2017
DNA methylation of synaptic genes in the prefrontal cortex is associated with aging and age-related cognitive impairment
Bioinformatics
Alberto Riva
2015
BigQ: a NoSQL based framework to handle genomic variants in i2b2
Bioinformatics
Alberto Riva
2018
SIRT1/HERC4 Locus Associated With Bisphosphonate?Induced Osteonecrosis of the Jaw: An Exome?Wide Association Analysis
Bioinformatics
Alberto Riva
2013
PASTA: splice junction identification from RNA-Sequencing data
Bioinformatics
Alberto Riva
2014
Influence of the Prader-Willi syndrome imprinting center on the DNA methylation landscape in the mouse brain
Bioinformatics
Alberto Riva
2019
A mutation in histone H2B represents a new class of oncogenic driver
Bioinformatics
Alberto Riva
2017
Dissecting low atmospheric pressure stress: transcriptome responses to the components of hypobaria in Arabidopsis
Bioinformatics
, Administration
Alberto Riva, Anna-Lisa Paul
2017
Genome-wide prioritization and transcriptomics reveal novel signatures associated with thiazide diuretics blood pressure response
Bioinformatics
Alberto Riva
2019
Catalytically inactive Dnmt3b rescues mouse embryonic development by accessory and repressive functions
Bioinformatics
Alberto Riva
2016
Nitrogen starvation?induced accumulation of triacylglycerol in the green algae: evidence for a role for ROC40, a transcription factor involved in circadian rhythm
Proteomics & Mass Spectrometry
Jin Koh, Ning Zhu
2015
The murine Pbx1-d lupus susceptibility allele accelerates mesenchymal stem cell differentiation and impairs their immunosuppressive function
Bioinformatics
Alberto Riva
,
Fahong Yu
2018
A gain of function mutation in the NSD2 histone methyltransferase drives glucocorticoid resistance of acute lymphoblastic leukemia
Bioinformatics
Alberto Riva
2020
Clinical Utility of Pharmacogene Panel?Based Testing in Patients Undergoing Percutaneous Coronary Intervention
Bioinformatics
Alberto Riva
2020
Seaweed natural products modify the host inflammatory response via Nrf2 signaling and alter colon microbiota composition and gene expression
Proteomics & Mass Spectrometry
Fanchao Zhu
2018
Mechanism sharing between genetic and gestational hypoxia-induced cardiac anomalies
Bioinformatics
Alberto Riva
2014
Thiol?based redox proteins in abscisic acid and methyl jasmonate signaling in Brassica napus guard cells
Proteomics & Mass Spectrometry
Ning Zhu
2019
DNMT3A with Leukemia-Associated Mutations Directs Sensitivity to DNA Damage at Replication Forks
Bioinformatics
Alberto Riva
2017
Patterns of Arabidopsis gene expression in the face of hypobaric stress
Bioinformatics
, Administration
Alberto Riva, Anna-Lisa Paul
2019
Identification of Genetic Vulnerabilities and Synthetic-Lethal Targets in NSD2-High Multiple Myeloma
Bioinformatics
Alberto Riva
2019
A Gain of Function Mutation in the NSD2 Histone Methyltransferase Drives Glucocorticoid Resistance Via Blocking Receptor Auto-Induction and BIM/Bmf Expression in ALL
Bioinformatics
Alberto Riva
2013
Proteomic Analysis of Salt Tolerance in Sugar Beet Monosomic Addition Line M14
Proteomics & Mass Spectrometry
Ning Zhu
,
Jin Koh
2019
Splicing repressor HNRNPC is an indispensable and'druggable'target in acute myeloid leukemia
Bioinformatics
Alberto Riva
2019
NetZen: A comprehensive network-based pathway and target discovery platform
Bioinformatics
Alberto Riva
2019
ESTIMATING THE CLINICAL VALUE OF A CUSTOMIZED CARDIOVACULAR PHARMACOGENETICS PANEL.
Bioinformatics
Alberto Riva
2018
PREVALENCE OF ACTIONABLE GENOTYPES AND DRUG EXPOSURE AMONG PATIENTS UNDERGOING CARDIAC CATHETERIZATION IN THE UNIVERSITY OF FLORIDA PERSONALIZED MEDICINE PROGRAM.
Bioinformatics
Alberto Riva
2017
SIRT1 SNPs Associated with Bisphosphonate-related Osteonecrosis of the Jaw (ONJ).
Bioinformatics
Alberto Riva
2013
Quantitative proteomics of tomato defense against Pseudomonas syringae infection
Proteomics & Mass Spectrometry
Ning Zhu, Jin Koh
2018
DAMON: an open source framework for reliable and reproducible analysis pipelines
Bioinformatics
Alberto Riva
2017
Metabolomics and Proteomics of Brassica napus Guard Cells in Response to Low CO2
Proteomics & Mass Spectrometry
Ning Zhu
2017
Data Fusion Approach for Learning Transcriptional Bayesian Networks
Bioinformatics
Alberto Riva
2017
Patterns of Arabidopsis
Bioinformatics
, Administration
Alberto Riva, Anna-Lisa Paul
2016
Identification of Idd22 Candidate Genes Using a Bioinformatics Approach
Bioinformatics
Alberto Riva
2015
Gene-Expression Novelty in Allopolyploid Cotton: A Proteomic Perspective
Proteomics & Mass Spectrometry
Jin Koh
2016
FINDING A NEEDLE IN THE HAYSTACK FOR THIAZIDE DIURETIC RESPONSE USING GENOMICS/TRANSCRIPTOMICS IN THE PHARMACOGENOMIC EVALUATION OF ANTIHYPERTENIVE RESPONSES (PEAR) STUDY.: PT-24
Bioinformatics
Alberto Riva
2015
Redox proteomics of tomato in response to Pseudomonas syringae infection
Proteomics & Mass Spectrometry
Ning Zhu
2014
Information Processing at the Cellular Level: Beyond the Dogma
Bioinformatics
Alberto Riva
2016
PARylation of the forkhead?associated domain protein DAWDLE regulates plant immunity
Proteomics & Mass Spectrometry
Ning Zhu
2018
Sex-specific airway hyperreactivity and sex-specific transcriptome remodeling in neonatal piglets challenged with intra-airway acid
Bioinformatics
Tongjun Gu
2018
Dicer cleaves 5?-extended microRNA precursors originating from RNA polymerase II transcription start sites
Bioinformatics
Tongjun Gu
2017
Modification of the Streptococcus mutans transcriptome by LrgAB and environmental stressors
Bioinformatics
Tongjun Gu
2015
cysTMTRAQAn Integrative Method for Unbiased Thiol-based Redox Proteomics
Proteomics & Mass Spectrometry
Ning Zhu, Fanchao Zhu
2017
GSR is not essential for the maintenance of antioxidant defenses in mouse cochlea: Possible role of the thioredoxin system as a functional backup for GSR
Bioinformatics
Tongjun Gu
2016
Quantitative proteomics and phosphoproteomics of sugar beet monosomic addition line M14 in response to salt stress
Proteomics & Mass Spectrometry
Jin Koh
2019
Integrating multi-platform genomic datasets for kidney renal clear cell carcinoma subtyping using stacked denoising autoencoders
Bioinformatics
Tongjun Gu
2014
The ctenophore genome and the evolutionary origins of neural systems
Bioinformatics
Fahong Yu
2014
In vitro selection with artificial expanded genetic information systems
Bioinformatics
Fahong Yu
2015
SMRT Sequencing of Long Tandem Nucleotide Repeats in SCA10 Reveals Unique Insight of Repeat Expansion Structure
Bioinformatics
Fahong Yu
2013
Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range
Bioinformatics
Fahong Yu
2017
Reprogramming of a defense signaling pathway in rough lemon and sweet orange is a critical element of the early response to Candidatus Liberibacter asiaticus
Bioinformatics
Fahong Yu
2017
Bicarbonate Induced Redox Proteome Changes in Arabidopsis Suspension Cells
Proteomics & Mass Spectrometry
Ning Zhu
2019
Type I interferon and interferon?stimulated gene expression in oral epithelial cells
Bioinformatics
Fahong Yu
2016
Draft genome sequence of Fusicladium effusum, cause of pecan scab
Bioinformatics
Fahong Yu
2016
Identification of thioredoxin targets in guard cell enriched epidermal peels using cysTMT proteomics
Proteomics & Mass Spectrometry
Ning Zhu
2017
Responses of the Housefly, Musca domestica, to the Hytrosavirus Replication: Impacts on Host's Vitellogenesis and Immunity
Bioinformatics
Fahong Yu
2020
Mice lacking uterine enhancer of zeste homolog 2 have transcriptomic changes associated with uterine epithelial proliferation
Bioinformatics
Fahong Yu
2020
Uterine infection alters the transcriptome of the bovine reproductive tract three months later
Bioinformatics
Fahong Yu
2018
The Effect of Permethrin Resistance on Aedes aegypti Transcriptome Following Ingestion of Zika Virus Infected Blood
Bioinformatics
Fahong Yu
2017
Identification of Gene Candidates Associated with Huanglongbing Tolerance, Using Candidatus Liberibacter asiaticus Flagellin 22 as a Proxy to Challenge Citrus
Bioinformatics
Fahong Yu
2016
Critical Role of COI1-Dependent Jasmonate Pathway in AAL toxin induced PCD in Tomato Revealed by Comparative Proteomics
Proteomics & Mass Spectrometry
Ning Zhu,
Jin Koh
2013
An EST database of the Caribbean fruit fly, Anastrepha suspensa (Diptera: Tephritidae)
Bioinformatics
Fahong Yu
2015
Salt stress response of membrane proteome of sugar beet monosomic addition line M14
Proteomics & Mass Spectrometry
Ning Zhu
,
Jin Koh
2014
Correlation of gene expression and contaminant concentrations in wild largescale suckers: A field-based study
Bioinformatics
Fahong Yu
2016
New nodes and edges in the glucosinolate molecular network revealed by proteomics and metabolomics of Arabidopsis myb28/29 and cyp79B2/B3 glucosinolate mutants
Proteomics & Mass Spectrometry
Ning Zhu
2015
HPV Population Profiling in Healthy Men by Next-Generation Deep Sequencing Coupled with HPV-QUEST
Bioinformatics
Fahong Yu
2013
Organ-specific remodeling of the Arabidopsis transcriptome in response to spaceflight
Administration
Anna-Lisa Paul
2013
Spaceflight engages heat shock protein and other molecular chaperone genes in tissue culture cells of Arabidopsis thaliana
Administration
Anna-Lisa Paul
2021
Epigenomic Regulators Elongator Complex Subunit 2 and Methyltransferase 1 Differentially Condition the Spaceflight Response in Arabidopsis
Administration
Anna-Lisa Paul
2022
Plants grown in Apollo lunar regolith present stress-associated transcriptomes that inform prospects for lunar exploration
Administration
Anna-Lisa Paul
2022
Effects of oxygen fertilization on damage reduction in flooded snap bean (Phaseolus vulgaris L.)
Administration
Anna-Lisa Paul
2021
High Throughput Ground-Based Reduced-Gravity Testing
Administration
Anna-Lisa Paul
2021
Shared Metabolic Remodeling Processes Characterize the Transcriptome of Arabidopsis thaliana within Various Suborbital Flight Environments
Administration
Anna-Lisa Paul
2013
Fundamental plant biology enabled by the space shuttle
Administration
Anna-Lisa Paul
2014
Molecular Reprogramming of Arabidopsis in Response to Perturbation of Jasmonate Signaling
Proteomics & Mass Spectrometry
Jin Koh
2016
The effect of spaceflight on the gravity-sensing auxin gradient of roots: GFP reporter gene microscopy on orbit
Administration
Anna-Lisa Paul
2017
Genetic dissection of the Arabidopsis spaceflight transcriptome: Are some responses dispensable for the physiological adaptation of plants to spaceflight?
Administration
Anna-Lisa Paul
2014
Proteomics profiling of fiber development and domestication in upland cotton (Gossypium hirsutum L.)
Proteomics & Mass Spectrometry
Jin Koh
2017
Skewing in Arabidopsis roots involves disparate environmental signaling pathways
Administration
Anna-Lisa Paul
2015
Phosphomimetic mutation of a conserved serine residue in Arabidopsis thaliana 14-3-3? suggests a regulatory role of phosphorylation in dimerization and target interactions
Administration
Anna-Lisa Paul
2017
Multiplex quantitative SILAC for analysis of archaeal proteomes: a case study of oxidative stress responses
Proteomics & Mass Spectrometry
Jin Koh
2018
Utilization of single?image normalized difference vegetation index (SI?NDVI) for early plant stress detection
Administration
Anna-Lisa Paul
2015
Spaceflight exploration in plant gravitational biology
Administration
Anna-Lisa Paul
2019
Epigenomics in an extraterrestrial environment: organ-specific alteration of DNA methylation and gene expression elicited by spaceflight in Arabidopsis thaliana
Administration
Anna-Lisa Paul
2017
ARG1 functions in the physiological adaptation of undifferentiated plant cells to spaceflight
Administration
Anna-Lisa Paul
2014
Mapping by VESGEN of leaf venation patterning in Arabidopsis with bioinformatic dimensions of gene expression
Administration
Anna-Lisa Paul
2013
Deployment of a fully-automated green fluorescent protein imaging system in a high arctic autonomous greenhouse
Administration
Anna-Lisa Paul
2019
HSFA2 functions in the physiological adaptation of undifferentiated plant cells to spaceflight
Administration
Anna-Lisa Paul
2014
Arabidopsis thaliana for spaceflight applicationspreparing dormant biology for passive stowage and on orbit activation
Administration
Anna-Lisa Paul
2019
The plant health monitoring system of the EDEN ISS space greenhouse in Antarctica during the 2018 experiment phase
Administration
Anna-Lisa Paul
2013
Integrated Proteomics and Metabolomics of Arabidopsis Acclimation to Gene-Dosage Dependent Perturbation of Isopropylmalate Dehydrogenases
Proteomics & Mass Spectrometry
Ning Zhu
2018
Comparing RNA?Seq and microarray gene expression data in two zones of the Arabidopsis root apex relevant to spaceflight
Administration
Anna-Lisa Paul
2016
Root growth patterns and morphometric change based on the growth media
Administration
Anna-Lisa Paul
2019
Cardiac MLC2 kinase is localized to the Z-disc and interacts with ?-actinin2
Proteomics & Mass Spectrometry
Jin Koh
2020
Root Skewing-Associated Genes Impact the Spaceflight Response of Arabidopsis thaliana
Administration
Anna-Lisa Paul
2013
Multispectral plant health imaging system for space biology and hypobaric plant growth studies
Administration
Anna-Lisa Paul
2016
Regulation of BZR1 in fruit ripening revealed by iTRAQ proteomics analysis
Proteomics & Mass Spectrometry
Ning Zhu
2019
A member of the CONSTANS-like protein family is a putative regulator of reactive oxygen species homeostasis and spaceflight physiological adaptation
Administration
Anna-Lisa Paul
2018
A Robust Methodology for Assessing Differential Homeolog Contributions to the Transcriptomes of Allopolyploids
Proteomics & Mass Spectrometry
,
Bioinformatics
Jin Koh
,
2014
Flexible imaging payload for real-time fluorescent biological imaging in parabolic, suborbital and space analog environments
Administration
Anna-Lisa Paul
2020
NDVI Imaging within Space Exploration Plant Growth ModulesA Case Study from EDEN ISS Antarctica
Administration
Anna-Lisa Paul
2020
Approaches for Surveying Cosmic Radiation Damage in Large Populations of Arabidopsis thaliana SeedsAntarctic Balloons and Particle Beams
Administration,
Bioinformatics
Anna-Lisa Paul
2019
Modelling Leaf Temperatures during Parabolic Flights
Administration
Anna-Lisa Paul
2018
Phenotypic characterization of an Arabidopsis T-DNA insertion line SALK_063500
Administration
Anna-Lisa Paul
2018
Dispersal of Human-Commensals at the Haughton Mars Project (HMP) Arctic Field-Site: Implications for the Forward Contamination Around Human Habitats on Mars
Administration
Anna-Lisa Paul
2018
Plants as Part of the Deep Space Exploration Schema
Administration
Anna-Lisa Paul
2013
Proteomic comparison of basal endosperm in maize miniature1 mutant and its wild-type Mn1
Proteomics & Mass Spectrometry
Ning Zhu
2017
Spectral Imaging within EDEN ISS for Plant Health and Productivity Assessment
Administration
Anna-Lisa Paul
2014
Identification of Regulatory Factors for Mesenchymal Stem Cell-Derived Salivary Epithelial Cells in a Co-Culture System
Proteomics & Mass Spectrometry
Jin Koh
2017
Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana
Administration
Anna-Lisa Paul
2016
Effects of Applying Hydrogen Peroxide on Phosphorus Uptake and Adhase Activity of Flooded Snap Bean Roots
Administration
Anna-Lisa Paul
2016
APEX-04 SpaceX-10
Administration
Anna-Lisa Paul
2015
Differential metabolomic responses of PAMP-triggered immunity and effector-triggered immunity in Arabidopsis suspension cells
Proteomics & Mass Spectrometry
Ning Zhu
2013
Advanced Colloids Experiment (ACE) Science Overview
Administration
Anna-Lisa Paul
2015
Quantitative proteomics reveals an important role of GsCBRLK in salt stress response of soybean
Proteomics & Mass Spectrometry
Ning Zhu,
Jin Koh
2013
GENE EXPRESSION IN SPACE BIOLOGY
Administration
Anna-Lisa Paul
2017
Identification of MAPK Substrates Using Quantitative Phosphoproteomics
Proteomics & Mass Spectrometry
Ning Zhu
2013
Resetting the course of drug development: stem cell banking in support of drug discovery
Administration
Steve Madore
2018
Characterization of thiol?based redox modifications of Brassica napusSNF1?related protein kinase 2.6?2C
Proteomics & Mass Spectrometry
Jin Koh
2017
Membrane Proteomics of Arabidopsis Glucosinolate Mutants cyp79B2/B3 and myb28/29
Proteomics & Mass Spectrometry
Ning Zhu
2014
Thiol-based Redox Proteins in Brassica napus Guard Cell Abscisic Acid and Methyl Jasmonate Signaling
Proteomics & Mass Spectrometry
Ning Zhu
2020
Redox proteomics of stomatal immunity reveals role of a lipid transfer protein in plant defense
Proteomics & Mass Spectrometry
Ning Zhu, Fanchao Zhu
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